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Journal Article

1. Centor RM, Jones BE (2024). Web Exclusive. Annals On Call - The Challenge of Diagnosing Community-Acquired Pneumonia. Ann Intern Med, 177(10), e2402748OC. ()
2. Jones BE, Chapman AB, Ying J, Rutter ED, Nevers MR, Baker A, Dean NC, Fix ML, Singh H, Cosby KS, Taber PA, Weir CD, Jones MM, Samore MH, Butler JM (2024). Diagnostic Discordance, Uncertainty, and Treatment Ambiguity in Community-Acquired Pneumonia : A National Cohort Study of 115 U.S. Veterans Affairs Hospitals. Ann Intern Med, 177(9), 1179-1189. ()
3. Butler JM, Taft T, Taber P, Rutter E, Fix M, Baker A, Weir C, Nevers M, Classen D, Cosby K, Jones M, Chapman A, Jones BE (2023). Pneumonia diagnosis performance in the emergency department: a mixed-methods study about clinicians' experiences and exploration of individual differences and response to diagnostic performance feedback. J Am Med Inform Assoc, 31(7), 1503-1513. ()
4. Hart JH, Sakata T, Eve JR, Butler AM, Wallin A, Carman C, Atwood B, Srivastava R, Jones BE, Stenehjem EA, Dean NC (2024). Diagnosis and Treatment of Pneumonia in Urgent Care Clinics: Opportunities for Improving Care. Open Forum Infect Dis, 11(3), ofae096. ()
5. Chapman AB, Peterson KS, Rutter E, Nevers M, Ying J, Classen D, Jones M, Samore M, Jones B (2024). A Linguistic Analysis Examining the Impact of COVID-19 on Pneumonia Diagnosis and Disease Models. Stud ÑÇÖÞ×ÔοÊÓƵ Technol Inform, 310, 1444-1445. ()
6. Carr JR, Knox DB, Butler AM, Lum MM, Jacobs JR, Jephson AR, Jones BE, Brown SM, Dean NC (2023). ICU Utilization After Implementation of Minor Severe Pneumonia Criteria in Real-Time Electronic Clinical Decision Support. Crit Care Med. ()
7. Ross JM, Sugimoto JD, Timmons A, Adams J, Deardoff K, Korpak A, Liu C, Moore K, Wilson D, Bedimo R, Chang KM, Cho K, Crothers K, Garshick E, Gaziano JM, Holodniy M, Hunt CM, Isaacs SN, Le E, Jones BE, Shah JA, Smith NL, Lee JS, EPIC Investigators (2023). Early Outcomes of SARS-CoV-2 Infection in a Multisite Prospective Cohort of Inpatient Veterans. Open Forum Infect Dis, 10(7), ofad330. ()
8. Jones BE, Sarvet AL, Ying J, Jin R, Nevers MR, Stern SE, Ocho A, McKenna C, McLean LE, Christensen MA, Poland RE, Guy JS, Sands KE, Rhee C, Young JG, Klompas M (2023). Incidence and Outcomes of Non-Ventilator-Associated Hospital-Acquired Pneumonia in 284 US Hospitals Using Electronic Surveillance Criteria. JAMA Netw Open, 6(5), e2314185. ()
9. Klompas M, Jones BE (2023). Is COVID-19 Care Better in Veterans ÑÇÖÞ×ÔοÊÓƵ Administration Hospitals, Ceteris Paribus? JAMA Netw Open, 6(5), e2315829. ()
10. Stern SE, Christensen MA, Nevers MR, Ying J, McKenna C, Munro S, Rhee C, Samore MH, Klompas M, Jones BE (2023). Electronic surveillance criteria for non-ventilator-associated hospital-acquired pneumonia: Assessment of reliability and validity. Infect Control Hosp Epidemiol, 1-7. ()
11. Jones BE, Ying J, Nevers M, Rutter E, Chapman A, Brenner R, Samore MH, Greene T (2023). Hospital Admission Decisions for Older Veterans with Community-onset Pneumonia: An Analysis of 118 U.S. Veterans Affairs Medical Centers. Acad Emerg Med, 30(4), 398-409. ()
12. Chapman AB, Peterson KS, Rutter E, Nevers M, Zhang M, Ying J, Jones M, Classen D, Jones B (2022). Development and evaluation of an interoperable natural language processing system for identifying pneumonia across clinical settings of care and institutions. JAMIA Open, 5(4), ooac114. ()
13. Crothers K, DeFaccio R, Tate J, Alba PR, Goetz MB, Jones B, King JT Jr, Marconi V, Ohl ME, Rentsch CT, Rodriguez-Barradas MC, Shahrir S, Justice AC, Akgn KM, Veterans Aging Cohort Study Clinical COVID-19 Working Group (2022). Dexamethasone in hospitalised COVID-19 patients not on intensive respiratory support. Eur Respir J, 60(1). ()
14. Jones BE, Ying J, Nevers MR, Alba PR, Patterson OV, Peterson KS, Rutter E, Christensen MA, Stern S, Jones MM, Gundlapalli A, Dean NC, Samore MC, Greene T (2022). Trends in Illness Severity, Hospitalization, and Mortality for Community-Onset Pneumonia at 118 US Veterans Affairs Medical Centers. J Gen Intern Med, 37(15), 3839-3847. ()
15. Lynch KE, Viernes B, Gatsby E, DuVall SL, Jones BE, Box TL, Kreisler C, Jones M (2021). Positive Predictive Value of COVID-19 ICD-10 Diagnosis Codes Across Calendar Time and Clinical Setting. Clin Epidemiol, 13, 1011-1018. ()
16. Chapman AB, Jones A, Kelley AT, Jones B, Gawron L, Montgomery AE, Byrne T, Suo Y, Cook J, Pettey W, Peterson K, Jones M, Nelson R (2021). ReHouSED: A novel measurement of Veteran housing stability using natural language processing. J Biomed Inform, 122, 103903. ()
17. Munro SC, Baker D, Giuliano KK, Sullivan SC, Haber J, Jones BE, Crist MB, Nelson RE, Carey E, Lounsbury O, Lucatorto M, Miller R, Pauley B, Klompas M (2021). Nonventilator hospital-acquired pneumonia: A call to action. Infect Control Hosp Epidemiol, 42(8), 991-996. ()
18. Weir CR, Taber P, Taft T, Reese TJ, Jones B, Del Fiol G (2020). Feeling and thinking: can theories of human motivation explain how EHR design impacts clinician burnout? J Am Med Inform Assoc, 28(5), 1042-1046. ()
19. Derington CG, Cohen JB, Mohanty AF, Greene TH, Cook J, Ying J, Wei G, Herrick JS, Stevens VW, Jones BE, Wang L, Zheutlin AR, South AM, Hanff TC, Smith SM, Cooper-DeHoff RM, King JB, Alexander GC, Berlowitz DR, Ahmad FS, Penrod MJ, Hess R, Conroy MB, Fang JC, Rubin MA, Beddhu S, Cheung AK, Xian W, Weintraub WS, Bress AP (2021). Angiotensin II receptor blocker or angiotensin-converting enzyme inhibitor use and COVID-19-related outcomes among US Veterans. PLoS One, 16(4), e0248080. ()
20. Gibson EG, Pender M, Angerbauer M, Cook C, Jones B, Spivak AM, Spivak ES, Swaminathan S (2021). Prolonged SARS-CoV-2 Illness in a Patient Receiving Ocrelizumab for Multiple Sclerosis. Open Forum Infect Dis, 8(7), ofab176. ()
21. Jones BE, Ying J, Nevers M, Alba PR, He T, Patterson OV, Jones MM, Stevens V, Shen J, Humpherys J, Peterson KS, Rutter ED, Gundlapalli AV, Weir CR, Dean NC, Fine MJ, Samore MC, Greene TH (2021). Computerized Mortality Prediction for Community-acquired Pneumonia at 117 VA Medical Centers. Ann Am Thorac Soc, 18(7), 1175-1184. ()
22. Christensen MA, Nevers M, Ying J, Haroldsen C, Stevens V, Jones MM, Yarbrough PM, Goetz MB, Restrepo MI, Madaras-Kelly K, Samore MH, Jones BE (2020). Simulated Adoption of 2019 Community-Acquired Pneumonia Guidelines Across 114 Veterans Affairs Medical Centers: Estimated Impact on Culturing and Antibiotic Selection in Hospitalized Patients. Clin Infect Dis, 72(Suppl 1), S59-S67. ()
23. Carr JR, Jones BE, Collingridge DS, Webb BJ, Vines C, Zobell B, Allen TL, Srivastava R, Rubin J, Dean NC (2020). Deploying an Electronic Clinical Decision Support Tool for Diagnosis and Treatment of Pneumonia Into Rural and Critical Access Hospitals: Utilization, Effect on Processes of Care, and Clinician Satisfaction. J Rural ÑÇÖÞ×ÔοÊÓƵ, 38(1), 262-269. ()
24. Stevens VW, Shoemaker HE, Jones MM, Jones BE, Nelson RE, Khader K, Samore MH, Rubin MA (2020). Validation of the SHEA/IDSA severity criteria to predict poor outcomes among inpatients and outpatients with Clostridioides difficile infection. Infect Control Hosp Epidemiol, 41(5), 510-516. ()
25. Jones BE, Ying J, Stevens V, Haroldsen C, He T, Nevers M, Christensen MA, Nelson RE, Stoddard GJ, Sauer BC, Yarbrough PM, Jones MM, Goetz MB, Greene T, Samore MH (2020). Empirical Anti-MRSA vs Standard Antibiotic Therapy and Risk of 30-Day Mortality in Patients Hospitalized for Pneumonia. JAMA Intern Med, 180(4), 552-560. ()
26. Dean NC, Vines CG, Rubin J, Collingridge DS, Mankivsky M, Srivastava R, Jones BE, Kuttler KG, Walker M, Jenson N, Webb BJ, Allen TL, Haug PJ (2020). Implementation of Real-Time Electronic Clinical Decision Support for Emergency Department Patients with Pneumonia Across a ÑÇÖÞ×ÔοÊÓƵcare System. AMIA Annu Symp Proc, 2019, 353-362. ()
27. Jones BE, Herman DD, Dela Cruz CS, Waterer GW, Metlay JP, Ruminjo JK, Thomson CC (2019). Summary for Clinicians: Clinical Practice Guideline for the Diagnosis and Treatment of Community-acquired Pneumonia. Ann Am Thorac Soc, 17(2), 133-138. ()
28. Bostwick AD, Jones BE, Paine R, Goetz MB, Samore M, Jones M (2019). Potential Impact of Hospital-acquired Pneumonia Guidelines on Empiric Antibiotics. An Evaluation of 113 Veterans Affairs Medical Centers. Ann Am Thorac Soc, 16(11), 1392-1398. ()
29. Jones BE, Collingridge DS, Vines CG, Post H, Holmen J, Allen TL, Haug P, Weir CR, Dean NC (2019). CDS in a Learning ÑÇÖÞ×ÔοÊÓƵ Care System: Identifying Physicians' Reasons for Rejection of Best-Practice Recommendations in Pneumonia through Computerized Clinical Decision Support. Appl Clin Inform, 10(1), 1-9. ()
30. Jones B (2018). Capsule Commentary on Sanz et al., A Composite of Functional Status and Pneumonia Severity Index Improves the Prediction of Pneumonia Mortality in Older Patients. J Gen Intern Med, 33(4), 493. ()
31. Dean NC, Griffith PP, Sorensen JS, McCauley L, Jones BE, Lee YC (2016). Pleural Effusions at First ED Encounter Predict Worse Clinical Outcomes in Patients With Pneumonia. Chest, 149(6), 1509-15. ()
32. Sauer BC, Jones BE, Globe G, Leng J, Lu CC, He T, Teng CC, Sullivan P, Zeng Q (2016). Performance of a Natural Language Processing (NLP) Tool to Extract Pulmonary Function Test (PFT) Reports from Structured and Semistructured Veteran Affairs (VA) Data. EGEMS (Wash DC), 4(1), 1217. ()
33. Jones BE, Jones MM, Huttner B, Stoddard G, Brown KA, Stevens VW, Greene T, Sauer B, Madaras-Kelly K, Rubin M, Goetz MB, Samore M (2015). Trends in Antibiotic Use and Nosocomial Pathogens in Hospitalized Veterans With Pneumonia at 128 Medical Centers, 2006-2010. Clin Infect Dis, 61(9), 1403-10. ()
34. Dean NC, Jones BE, Jones JP, Ferraro JP, Post HB, Aronsky D, Vines CG, Allen TL, Haug PJ (2015). Impact of an Electronic Clinical Decision Support Tool for Emergency Department Patients With Pneumonia. Ann Emerg Med, 66(5), 511-20. ()
35. Jones BE, Sauer B, Jones MM, Campo J, Damal K, He T, Ying J, Greene T, Goetz MB, Neuhauser MM, Hicks LA, Samore MH (2015). Variation in Outpatient Antibiotic Prescribing for Acute Respiratory Infections in the Veteran Population: A Cross-sectional Study. Ann Intern Med, 163(2), 73-80. ()
36. Jones BE, Jones JP, Vines CG, Dean NC (2014). Validating hospital admission criteria for decision support in pneumonia. BMC Pulm Med, 14, 149. ()
37. Jones B, Gundlapalli AV, Jones JP, Brown SM, Dean NC (2013). Admission decisions and outcomes of community-acquired pneumonia in the homeless population: a review of 172 patients in an urban setting. Am J Public ÑÇÖÞ×ÔοÊÓƵ, 103 Suppl 2, S289-93. ()
38. Jones BE, Stokes S, McKenzie S, Nilles E, Stoddard GJ (2013). Management of high altitude pulmonary edema in the Himalaya: a review of 56 cases presenting at Pheriche medical aid post (4240 m). Wilderness Environ Med, 24(1), 32-6. ()
39. Lanspa MJ, Jones BE, Brown SM, Dean NC (2013). Mortality, morbidity, and disease severity of patients with aspiration pneumonia. J Hosp Med, 8(2), 83-90. ()
40. Brown SM, Jones JP, Aronsky D, Jones BE, Lanspa MJ, Dean NC (2012). Relationships among initial hospital triage, disease progression and mortality in community-acquired pneumonia. Respirology, 17(8), 1207-13. ()

Review

1. Duong KNC, Nguyen DT, Kategeaw W, Liang X, Khaing W, Visnovsky LD, Veettil SK, McFarland MM, Nelson RE, Jones BE, Pavia AT, Coates E, Khader K, Love J, Vega Yon GG, Zhang Y, Willson T, Dorsan E, Toth DJA, Jones MM, Samore MH, Chaiyakunapruk N (2024). Incorporating social determinants of health into transmission modeling of COVID-19 vaccine in the US: a scoping review. [Review]. Lancet Reg ÑÇÖÞ×ÔοÊÓƵ Am, 35, 100806. ()
2. Jones B, Waterer G (2020). Advances in community-acquired pneumonia. [Review]. Ther Adv Infect Dis, 7, 2049936120969607. ()

Commentary

1. Jones B (2015 Dec). GETTING THE STORY Lancet Respir Med. 2015 Dec;. Lancet Respir Med, 3(12), 932.

Editorial

1. Jones BE, Jones MM (2019). Pneumonia and Electronic ÑÇÖÞ×ÔοÊÓƵ Records-A Window Into Disease, A Mirror of Our Behavior, or Just Another Streetlight? Clin Infect Dis, 71(7), 1613-1615. ()
2. Webb BJ, Jones B, Dean NC (2016 Apr). Empiric antibiotic selection and risk prediction of drug-resistant pathogens in community-onset pneumonia. Curr Opin Infect Dis, 28(2), 167-77.

Letter

1. Dean NC, Jones BE, Ferraro JP, Vines CG, Haug PJ (2013). Performance and utilization of an emergency department electronic screening tool for pneumonia. [Letter to the editor]. JAMA Intern Med, 173(8), 699-701. ()

Abstract

1. Jones BE, Jones MM, Huttner B, Rubin M, Stoddard G, Greene T Samore M (2014). Going Big: Five Year Trends In Antibiotic Use For Hospitalized Pneumonia Patients in National VA Data, 2006-2010 [Abstract]. American Thoracic Society.
2. Jones BE, Jones JP, Stoddard GS, Vines C, Jephson A, Ferraro J, Post H, Briggs B, Griffith P, Kumar N, Allen T, Haug P, Dean N (2013). Impact of an Electronic Decision Support Tool on Outcomes for Emergency Department Patients with Pneumonia [Abstract]. European Respiratory Society Annual Congress, Barcelona, Spain.
3. Jones BE, Jones JP, Jephson A, Kumar N, Briggs B, Vines C, Allen T, Dean NC (2012). Developing hospital admission criteria for electronic pneumonia decision support [Abstract]. European Respiratory Society Annual Congress, Vienna, Austria.
4. Jones BE, Jones JP, Jephson A, Kumar N, Briggs B, Vines C, Allen T, Dean NC (2012). eCURB outperforms CURB-65 and A- DROP for predicting 30- day mortality in pneumonia [Abstract]. European Respiratory Society Annual Congress, Vienna, Austria.
5. Jones BE, Ferraro JP, Haug P, Mynam K, Post H, Li Y, Jephson A, Stoddard G, Vines C, Allen T, Dean NC (2012). Performance of a real-time electronic screening tool for pneumonia [Abstract]. American Thoracic Society International Conference, San Franscisco, CA.
6. Dean NC, Jones J, Sanz Herrero F, Jephson A, Brown S, Jones BE, Vines C (2012). Calculating PaO2/FiO2 From SpO2 In Emergency Department Patients With Pneumonia; Comparison Of the Severinghaus And Rice Equations In A Utah Population [Abstract]. American Thoracic Society International Conference, San Franscisco, CA.

Other

1. Duong KNC, Le LM, Veettil SK, Saidoung P, Wannaadisai W, Nelson RE, Friedrichs M, Jones BE, Pavia AT, Jones MM, Samore MH, Chaiyakunapruk N (2023). Disparities in COVID-19 related outcomes in the United States by race and ethnicity pre-vaccination era: an umbrella review of meta-analyses. Front Public ÑÇÖÞ×ÔοÊÓƵ (11, p. 1206988). Switzerland. ()

Video/Film/CD/Web/Podcast

1. Jones, Barbara interviewee (Sept 1, 2015). Are you an Antibiotic Overprescriber? [Web]. Boston, MA: New England Journal of Medicine Journal Watch: Audio General Medicine. Available: www.JWatch.org.

News

• No Benefit Found in Using Broad-Spectrum Antibiotics as Initial Pneumonia Treatment
• Hospital Pneumonia Diagnoses are Uncertain, Revised More than Half the Time, Study Finds
• What is Walking Pneumonia and Do You Need to be Worried?

Podcasts

• Changing Attitudes About Antibiotics to Combat the Superbug Problem